Programa de Pós-Graduação em Biologia de Agentes Infecciosos e Parasitários - PPGBAIP/ICB
URI Permanente desta comunidadehttps://repositorio.ufpa.br/handle/2011/4696
O Programa de Pós-Graduação em Biologia de Agentes Infecciosos e Parasitários (PPGBAIP) é um programa do Instituto de Ciências Biológicas (ICB) da Universidade Federal do Pará (UFPA). O PPGBAIP contempla a formação de profissionais das áreas das Ciências Biológicas, Biomédicas, Médicas e afins em nível de mestrado e doutorado.
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Dissertação Acesso aberto (Open Access) Avaliação da diversidade de insetos hematófagos da subordem Nematocera e de vertebrados silvestres: transmissão de arbovírus na área de influência do Projeto Salobo, Carajás, Pará(Universidade Federal do Pará, 2009) MONTEIRO, Hamilton Antonio de Oliveira; VASCONCELOS, Pedro Fernando da Costa; http://lattes.cnpq.br/0973550817356564Aiming to evaluate the diversity of hematophagous insects and sylvan vertebrates, as well as the arbovirus fauna present in the area, a longitudinal study was performed in the Salobo Project area, Mineral Province of Carajas, Pará state, Brazil, between December 2005 and June 2007 (seven scientific expeditions), before the action of mineral extraction be launched. Insects belonging to the families Ceratopogonidae, Culicidae, Psychodidae, and Simulidae were collected using the miniature CDC and Shannon light traps, and human bait; sylvan vertebrates (birds, small mammals and reptilians) were also captured in the are using Shermann and Tommahwak traps. Biological specimens from insects and vertebrates were used to attempt of virus isolation in suckling mice, while the vertebrate serum samples to determine the antibody prevalence to 19 arboviruses by hemagglutination inhibition (HI) tests. A total of 44,795 (1,220 lots) hematophagous insects were collected, mostly of Psychodidae. The most abundant species of Culicidae were Haemagogus leucocelaenus and Haemgogus janthinomys; a total of 1,288 vertebrates were also captured; the rodents Proechimys guyannensis and Oryzomys capito, and the birds Turdus albicolis and Phlegopsis nigromaculata were the most prevalent species in the area. Three Tucunduba virus strains were isolated from lots of Anopheles (Nys.) sp., Culex coronator and Wyeomyia sp. HI antibodies were found to Bussuquara virus, Cacipacore virus, Icoaraci virus, Ilheus virus, Mucambo virus Rocio virus, Saint Louis encephalitis virus (SLEV), and western equine encephalitis virus. The most prevalent arbovirus by HI was the SLEV.Tese Acesso aberto (Open Access) Caracterização genética, correlação antigênica e ecoepidemiológica dos vírus do grupo C (Bunyaviridae, orthobunyavirus) isolados nas américas(Universidade Federal do Pará, 2005-02-28) NUNES, Márcio Roberto Teixeira; ROSA, Amélia Paes de Andrade Travassos da; VASCONCELOS, Pedro Fernando da Costa; http://lattes.cnpq.br/0973550817356564To date, no molecular studies on group C viruses (Bunyaviridae: Orthobunyavirus) have been published. The current work determined the complete small RNA segment and partial medium RNA segment nucleotide sequences for group C members. The full-length SRNA sequences ranged from 915 to 926 nucleotides in length, and revealed similar organization in comparison with other orthobunyaviruses. Based on the 705 nt of the N gene, group C members were distributed into 3 major phylogenetic groups, with the exception of Madrid virus that was placed outside of these 3 groups. Analysis of the Caraparu virus strain BeH 5546 revealed that it has an SRNA sequence nearly identical to that of Oriboca virus and is a natural reassortant virus. In addition, analysis of 345 nucleotides of the Gn gene for seven group C viruses and for strain BeH 5546 revealed a different phylogenetic topology, suggesting a reassortment pattern among them. These findings represent the first evidence for natural reassortment among the group C viruses, which include several human pathogens. Furthermore, our genetic data corroborate previous antigenic relationships determined using serologic assays (complement fixation, hemagglutination inhibition and neutralization tests), and suggest that a combination of informative molecular, serological and ecological data is a helpful tool to understand the molecular epidemiology of orthobunyavirus.Tese Acesso aberto (Open Access) Caracterização molecular e relação filogenética do genoma completo dos arbovírus Bussuquara, Iguape, Ilhéus e Rocio (Família Flaviviridae, Gênero Flavivirus)(Universidade Federal do Pará, 2009-11-27) MEDEIROS, Daniele Barbosa de Almeida; NUNES, Márcio Roberto Teixeira; http://lattes.cnpq.br/0299116892743368; VASCONCELOS, Pedro Fernando da Costa; http://lattes.cnpq.br/0973550817356564Flaviviruses have been known due their complex biological cycle and their relevance in public health and global economy. The ecologic aspected and clinic pictures are related with phylogeny and evolution of flaviviruses. This work aims the molecular characterization of Bussuquara (BSQV), Iguape (IGUV), Ilheus (VILH) e Rocio (VROC) flaviviruses genomes, determining their phylogenetic relationships with others members of genus Flavivirus. The study included: the full-length sequencing of the four Brazilian flaviviruses; analyzes of the predictive secondary structure of RNA and conserved sequences in the 3’NCR; determination of cleavage and glicosilation sites, cisteine residues and conserved motifs in the polyprotein; and similarity and phylogenetic analyzes. The BSQV, IGUV, VILH and VROC genomes present 10815 nt, 10922 nt, 10775 nt, and 10794 nt, respectively. The conserved standard sequences in 3’NCR of BSQV was RCS2-CS2-CS1, while to IGUV, ILHV and ROCV were CS3-RCS2-CS2-CS1. The secondary structure of RNA obtained for the Brazilian flaviviruses were similar to the other flaviviruses. The numbers of the glicosilation sites to PrM, E and NS1 proteins were distinct among the studied Brazilian flaviviruses, therefore the pattern 6,12,12 Cis residues and the cleavage sites were conserved. In the E protein, some singles mutations were observed in fusion peptide of BSQV, IGUV and ROCV, and the RGD motif were distinct for the flaviviruses under study. The motif that determines the MTase-SAM activity in NS5, as well as the helicase and protease activity in NS3 were conserved. Among the eight polimerase motifs in NS5, only the V, VI and VII motifs were observed single mutations in ILHV and ROCV. The similarity analyzes showed that BSQV presents high relationship with VIGU, while ILHV and ROV were more related among themselves, however those viruses were considerated distincts species. Based in the phylogenetic analyzes, molecular and biological characteristics, it was proposed the establishment of three distinct genetic groups: the Rocio group, grouping ILHV and ROCV, Bussuquara group formed by BSQV and Naranjal virus; and Aroa group, that include Aroa virus and IGUV.Tese Acesso aberto (Open Access) Soroprevalência de anticorpos e padronização do teste ELISA sanduíche indireto para 19 tipos de arbovírus em herbívoros domésticos(Universidade Federal do Pará, 2010-09-30) CASSEB, Alexandre do Rosário; VASCONCELOS, Pedro Fernando da Costa; http://lattes.cnpq.br/0973550817356564The brazilian Amazon region maintains the largest variety of arboviruses and the state of Pará is responsible for 26% of this territory, so the major goal of this work was to determine the prevalence and distribution of HI antibodies to 19 domestic arbovirus in domestic herbivores in the state of Pará and to standardize an indirect sandwich IgG ELISA test to serum samples of equines, cattle, buffaloes and sheep. In all species studied and throughout the State of Pará a large prevalence of HI antibodies to all arbovirus analyzed was observed and SLEV, ILHV, EEEV, MAGV and WEEV, showed higher prevalence, where the SLEV was the most prevalent. Regarding the virus families HI antibodies to MAGV was the most prevalent Bunyaviridae in all species, the most prevalent Flaviviridae was SLEV in all species and in the family Togaviridae the EEEV was more prevalent in horses. In order to analyze the prevalence of HI antibodies by animal species was observed that horses did not show significant differences compared to buffaloes, however, showed significant difference compared to cattle and sheep; there was not observed significant difference between the ruminant species. Using sandwich indirect IgG ELISA a large number of crossed reactions were found. This enzymatic test can be used to detect IgG antibodies among families of arboviruses studied.